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&lt;p&gt;After running &lt;tt class="docutils literal"&gt;composer install&lt;/tt&gt; two extensions had been removed from &lt;tt class="docutils literal"&gt;PackageStates.php&lt;/tt&gt;: &lt;tt class="docutils literal"&gt;simulatebe&lt;/tt&gt; and &lt;tt class="docutils literal"&gt;fe_change_pwd&lt;/tt&gt;.&lt;/p&gt;
&lt;pre class="literal-block"&gt;
&amp;gt; typo3cms install:generatepackagestates
The following extensions have been added to the generated PackageStates.php file: core, scheduler, extbase, fluid, frontend, fluid_styled_content, install, info, linkvalidator, reports, redirects, recordlist, backend, recycler, belog, beuser, extensionmanager, felogin, filelist, lowlevel, rte_ckeditor, seo, sys_note, t3editor, tstemplate, viewpage, addons_em, static_info_tables, static_info_tables_de, flux, vhs, ce_timeline, func, masi, pxa_lpeh, sentry_client, t3adminer, typo3db_legacy
&lt;/pre&gt;
&lt;p&gt;&lt;tt class="docutils literal"&gt;composer list&lt;/tt&gt; said both were installed.&lt;/p&gt;
&lt;p&gt;The folder of those extensions were nearly empty, and I had to reinstall them:&lt;/p&gt;
&lt;pre class="literal-block"&gt;
$ composer2 reinstall derhansen/fe_change_pwd
Gathering patches for root package.
  - Removing derhansen/fe_change_pwd (2.0.4)
  - Downloading derhansen/fe_change_pwd (2.0.4)
Gathering patches for root package.
Gathering patches for dependencies. This might take a minute.
  - Installing derhansen/fe_change_pwd (2.0.4): Extracting archive

$ composer2 reinstall cabag/simulatebe
Gathering patches for root package.
  - Removing cabag/simulatebe (10.4.0)
  - Downloading cabag/simulatebe (10.4.0)
Gathering patches for root package.
Gathering patches for dependencies. This might take a minute.
  - Installing cabag/simulatebe (10.4.0): Extracting archive

$ composer2 install
.. correct package states were generated
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